APPLICATIONS OF GRAPH THEORY

 

Applications[edit]

The network graph formed by Wikipedia editors (edges) contributing to different Wikipedia language versions (vertices) during one month in summer 2013.[6]

Graphs can be used to model many types of relations and processes in physical, biological,[7][8] social and information systems.[9] Many practical problems can be represented by graphs. Emphasizing their application to real-world systems, the term network is sometimes defined to mean a graph in which attributes (e.g. names) are associated with the vertices and edges, and the subject that expresses and understands real-world systems as a network is called network science.

Computer science[edit]

Within computer science, causal and non-causal linked structures are graphs that are used to represent networks of communication, data organization, computational devices, the flow of computation, etc. For instance, the link structure of a website can be represented by a directed graph, in which the vertices represent web pages and directed edges represent links from one page to another. A similar approach can be taken to problems in social media,[10] travel, biology, computer chip design, mapping the progression of neuro-degenerative diseases,[11][12] and many other fields. The development of algorithms to handle graphs is therefore of major interest in computer science. The transformation of graphs is often formalized and represented by graph rewrite systems. Complementary to graph transformation systems focusing on rule-based in-memory manipulation of graphs are graph databases geared towards transaction-safe, persistent storing and querying of graph-structured data.

Linguistics[edit]

Graph-theoretic methods, in various forms, have proven particularly useful in linguistics, since natural language often lends itself well to discrete structure. Traditionally, syntax and compositional semantics follow tree-based structures, whose expressive power lies in the principle of compositionality, modeled in a hierarchical graph. More contemporary approaches such as head-driven phrase structure grammar model the syntax of natural language using typed feature structures, which are directed acyclic graphs. Within lexical semantics, especially as applied to computers, modeling word meaning is easier when a given word is understood in terms of related words; semantic networks are therefore important in computational linguistics. Still, other methods in phonology (e.g. optimality theory, which uses lattice graphs) and morphology (e.g. finite-state morphology, using finite-state transducers) are common in the analysis of language as a graph. Indeed, the usefulness of this area of mathematics to linguistics has borne organizations such as TextGraphs, as well as various 'Net' projects, such as WordNet, VerbNet, and others.

Physics and chemistry[edit]

Graph theory is also used to study molecules in chemistry and physics. In condensed matter physics, the three-dimensional structure of complicated simulated atomic structures can be studied quantitatively by gathering statistics on graph-theoretic properties related to the topology of the atoms. Also, "the Feynman graphs and rules of calculation summarize quantum field theory in a form in close contact with the experimental numbers one wants to understand."[13] In chemistry a graph makes a natural model for a molecule, where vertices represent atoms and edges bonds. This approach is especially used in computer processing of molecular structures, ranging from chemical editors to database searching. In statistical physics, graphs can represent local connections between interacting parts of a system, as well as the dynamics of a physical process on such systems. Similarly, in computational neuroscience graphs can be used to represent functional connections between brain areas that interact to give rise to various cognitive processes, where the vertices represent different areas of the brain and the edges represent the connections between those areas. Graph theory plays an important role in electrical modeling of electrical networks, here, weights are associated with resistance of the wire segments to obtain electrical properties of network structures.[14] Graphs are also used to represent the micro-scale channels of porous media, in which the vertices represent the pores and the edges represent the smaller channels connecting the pores. Chemical graph theory uses the molecular graph as a means to model molecules. Graphs and networks are excellent models to study and understand phase transitions and critical phenomena. Removal of nodes or edges leads to a critical transition where the network breaks into small clusters which is studied as a phase transition. This breakdown is studied via percolation theory.[15]

Social sciences[edit]

Graph theory in sociology: Moreno Sociogram (1953).[16]

Graph theory is also widely used in sociology as a way, for example, to measure actors' prestige or to explore rumor spreading, notably through the use of social network analysis software. Under the umbrella of social networks are many different types of graphs.[17] Acquaintanceship and friendship graphs describe whether people know each other. Influence graphs model whether certain people can influence the behavior of others. Finally, collaboration graphs model whether two people work together in a particular way, such as acting in a movie together.

Biology[edit]

Likewise, graph theory is useful in biology and conservation efforts where a vertex can represent regions where certain species exist (or inhabit) and the edges represent migration paths or movement between the regions. This information is important when looking at breeding patterns or tracking the spread of disease, parasites or how changes to the movement can affect other species.

Graphs are also commonly used in molecular biology and genomics to model and analyse datasets with complex relationships. For example, graph-based methods are often used to 'cluster' cells together into cell-types in single-cell transcriptome analysis. Another use is to model genes or proteins in a pathway and study the relationships between them, such as metabolic pathways and gene regulatory networks.[18] Evolutionary trees, ecological networks, and hierarchical clustering of gene expression patterns are also represented as graph structures.

Graph theory is also used in connectomics;[19] nervous systems can be seen as a graph, where the nodes are neurons and the edges are the connections between them.

Mathematics[edit]

In mathematics, graphs are useful in geometry and certain parts of topology such as knot theory. Algebraic graph theory has close links with group theory. Algebraic graph theory has been applied to many areas including dynamic systems and complexity.

Other topics[edit]

A graph structure can be extended by assigning a weight to each edge of the graph. Graphs with weights, or weighted graphs, are used to represent structures in which pairwise connections have some numerical values. For example, if a graph represents a road network, the weights could represent the length of each road. There may be several weights associated with each edge, including distance (as in the previous example), travel time, or monetary cost. Such weighted graphs are commonly used to program GPS's, and travel-planning search engines that compare flight times and costs.

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